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KEGGandMetacoreDzPathwaysGEO

This is the development version of KEGGandMetacoreDzPathwaysGEO; for the stable release version, see KEGGandMetacoreDzPathwaysGEO.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0

Disease Datasets from GEO

DOI: 10.18129/B9.bioc.KEGGandMetacoreDzPathwaysGEO

Bioconductor version: Development (3.24)

This is a collection of 18 data sets for which the phenotype is a disease with a corresponding pathway in either KEGG or metacore database.This collection of datasets were used as gold standard in comparing gene set analysis methods.

Author: Gaurav Bhatti

Maintainer: Gaurav Bhatti <gbhatti at med.wayne.edu>

Citation (from within R, enter citation("KEGGandMetacoreDzPathwaysGEO")):

Gaurav Bhatti. KEGGandMetacoreDzPathwaysGEO: Disease Datasets from GEO. doi:10.18129/B9.bioc.KEGGandMetacoreDzPathwaysGEO, R package version 1.33.0, https://bioconductor.org/packages/KEGGandMetacoreDzPathwaysGEO.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("KEGGandMetacoreDzPathwaysGEO")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("KEGGandMetacoreDzPathwaysGEO")

Details

Package Archives

Follow Installation instructions to use this package in your R session.