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Illumina450ProbeVariants.db

This is the development version of Illumina450ProbeVariants.db; for the stable release version, see Illumina450ProbeVariants.db.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13

Annotation Package combining variant data from 1000 Genomes Project for Illumina HumanMethylation450 Bead Chip probes


Bioconductor version: Development (3.24)

Includes details on variants for each probe on the 450k bead chip for each of the four populations (Asian, American, African and European)

Author: Lee Butcher

Maintainer: Tiffany Morris <tiffany.morris at ucl.ac.uk>

Citation (from within R, enter citation("Illumina450ProbeVariants.db")):

Lee Butcher. Illumina450ProbeVariants.db: Annotation Package combining variant data from 1000 Genomes Project for Illumina HumanMethylation450 Bead Chip probes. doi:10.18129/B9.bioc.Illumina450ProbeVariants.db, R package version 1.49.0, https://bioconductor.org/packages/Illumina450ProbeVariants.db.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("Illumina450ProbeVariants.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF

Details

biocViews CancerData, ChipOnChipData, ExperimentData, Homo_sapiens_Data, SNPData
Version1.49.0
In Bioconductor sinceBioC 2.13 (R-3.0) (13 years)
License GPL-3
Depends R (>= 3.0.1)
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Illumina450ProbeVariants.db_1.49.0.tar.gz
Windows Binary (x86_64)
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macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/Illumina450ProbeVariants.db
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/Illumina450ProbeVariants.db
Package Short Url https://bioconductor.org/packages/Illumina450ProbeVariants.db/
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