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HiCDataLymphoblast

This is the development version of HiCDataLymphoblast; for the stable release version, see HiCDataLymphoblast.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14

Human lymphoblastoid HiC data from Lieberman-Aiden et al. 2009

DOI: 10.18129/B9.bioc.HiCDataLymphoblast

Bioconductor version: Development (3.24)

The HiC data from human lymphoblastoid cell line (HindIII restriction) was retrieved from the sequence read archive and two ends of the paired reads were aligned separately with bowtie.

Author: Borbala Mifsud

Maintainer: Borbala Mifsud <b.mifsud at qmul.ac.uk>

Citation (from within R, enter citation("HiCDataLymphoblast")):

Borbala Mifsud. HiCDataLymphoblast: Human lymphoblastoid HiC data from Lieberman-Aiden et al. 2009. doi:10.18129/B9.bioc.HiCDataLymphoblast, R package version 1.49.0, https://bioconductor.org/packages/HiCDataLymphoblast.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("HiCDataLymphoblast")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HiCDataLymphoblast")

Details

Package Archives

Follow Installation instructions to use this package in your R session.