DonaPLLP2013

This is the development version of DonaPLLP2013; for the stable release version, see DonaPLLP2013.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13

Supplementary data package for Dona et al. (2013) containing example images and tables

Bioconductor version: Development (3.24)

An experiment data package associated with the publication Dona et al. (2013). Package contains runnable vignettes showing an example image segmentation for one posterior lateral line primordium, and also the data table and code used to analyze tissue-scale lifetime-ratio statistics.

Author: Erika Dona, Joseph D. Barry, Guillaume Valentin, Charlotte Quirin, Anton Khmelinskii, Andreas Kunze, Sevi Durdu, Lionel R. Newton, Ana Fernandez-Minan, Wolfgang Huber, Michael Knop, Darren Gilmour

Maintainer: Joseph D. Barry <joseph.barry at embl.de>

Citation (from within R, enter citation("DonaPLLP2013")):

Erika Dona, Joseph D. Barry, Guillaume Valentin, Charlotte Quirin, Anton Khmelinskii, Andreas Kunze, Sevi Durdu, Lionel R. Newton, Ana Fernandez-Minan, Wolfgang Huber, Michael Knop, Darren Gilmour. DonaPLLP2013: Supplementary data package for Dona et al. (2013) containing example images and tables. doi:10.18129/B9.bioc.DonaPLLP2013, R package version 1.51.0, https://bioconductor.org/packages/DonaPLLP2013.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("DonaPLLP2013")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DonaPLLP2013")

PLLP image analysis	PDF	R Script
PLLP tissue-scale ratio statistics	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, Tissue
Version	1.51.0
In Bioconductor since	BioC 2.13 (R-3.0) (13 years)
License	Artistic-2.0
Depends	EBImage, parallel
Imports
System Requirements
URL

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Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	DonaPLLP2013_1.51.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository	git clone https://git.bioconductor.org/packages/DonaPLLP2013
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/DonaPLLP2013
Package Short Url	https://bioconductor.org/packages/DonaPLLP2013/
Package Downloads Report	Download Stats