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ChimpHumanBrainData

This is the development version of ChimpHumanBrainData; for the stable release version, see ChimpHumanBrainData.

Chimp and human brain data package


Bioconductor version: Development (3.19)

This data package contains chimp and human brain data extracted from the ArrayExpress accession E-AFMX-2. Both human and chimp RNAs were run on human hgu95av2 Affymetrix arrays. It is a useful dataset for tutorials.

Author: Roman Jaksik, Naomi Altman, and Sean Davis

Maintainer: Sean Davis <seandavi at gmail.com>

Citation (from within R, enter citation("ChimpHumanBrainData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ChimpHumanBrainData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ChimpHumanBrainData")
DiffExpressVignette.pdf PDF R Script
Reference Manual PDF

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, MicroarrayData, Pan_troglodytes_Data, Tissue, TissueMicroarrayData
Version 1.41.1
License MIT
Depends affy, qvalue, limma, hexbin, statmod
Imports
System Requirements
URL
See More
Suggests hgu95av2cdf
Linking To
Enhances
Depends On Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ChimpHumanBrainData_1.41.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/ChimpHumanBrainData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ChimpHumanBrainData
Package Short Url https://bioconductor.org/packages/ChimpHumanBrainData/
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