COHCAPanno
This is the development version of COHCAPanno; for the stable release version, see COHCAPanno.
Annotations for City of Hope CpG Island Analysis Pipeline
Bioconductor version: Development (3.24)
Provides genomic location, nearby CpG island and nearby gene information for common Illumina methylation array platforms
Author: Charles Warden
Maintainer: Charles Warden <cwarden45 at gmail.com>
citation("COHCAPanno")):Charles Warden. COHCAPanno: Annotations for City of Hope CpG Island Analysis Pipeline. doi:10.18129/B9.bioc.COHCAPanno, R package version 1.49.0, https://bioconductor.org/packages/COHCAPanno.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("COHCAPanno") For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("COHCAPanno") | COHCAPanno Vignette | R Script | |
| Reference Manual |
Details
| biocViews | ArrayExpress, CpGIslandData, ExperimentData, GEO, Homo_sapiens_Data, MethylationArrayData, MicroarrayData |
| Version | 1.49.0 |
| In Bioconductor since | BioC 2.14 (R-3.1) (12.5 years) |
| License | GPL-3 |
| Depends | R (>= 2.10) |
| Imports | |
| System Requirements | |
| URL |
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| Build Report | Build Report, r-universe |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | COHCAPanno_1.49.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/COHCAPanno |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/COHCAPanno |
| Package Short Url | https://bioconductor.org/packages/COHCAPanno/ |
| Package Downloads Report | Download Stats |