ALLMLL

This is the development version of ALLMLL; for the stable release version, see ALLMLL.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

A subset of arrays from a large acute lymphoblastic leukemia (ALL) study

Bioconductor version: Development (3.24)

This package provides probe-level data for 20 HGU133A and 20 HGU133B arrays which are a subset of arrays from a large ALL study. The data is for the MLL arrays. This data was published in Mary E. Ross, Xiaodong Zhou, Guangchun Song, Sheila A. Shurtleff, Kevin Girtman, W. Kent Williams, Hsi-Che Liu, Rami Mahfouz, Susana C. Raimondi, Noel Lenny, Anami Patel, and James R. Downing (2003) Classification of pediatric acute lymphoblastic leukemia by gene expression profiling Blood 102: 2951-2959

Author: B. M. Bolstad <bolstad@stat.berkeley.edu

Maintainer: B. M. Bolstad <bmb at bmbolstad.com>

Citation (from within R, enter citation("ALLMLL")):

B. M. Bolstad. ALLMLL: A subset of arrays from a large acute lymphoblastic leukemia (ALL) study. doi:10.18129/B9.bioc.ALLMLL, R package version 1.53.0, https://bioconductor.org/packages/ALLMLL.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("ALLMLL")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	CancerData, ExperimentData, LeukemiaCancerData, MicroarrayData
Version	1.53.0
In Bioconductor since	BioC 2.5 (R-2.10) or earlier (> 17 years)
License	GPL-2
Depends	R (>= 2.10), affy (>= 1.23.4)
Imports
System Requirements
URL

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Suggests Me	arrayQualityMetrics, pvac
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Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ALLMLL_1.53.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository	git clone https://git.bioconductor.org/packages/ALLMLL
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ALLMLL
Package Short Url	https://bioconductor.org/packages/ALLMLL/
Package Downloads Report	Download Stats