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phastCons7way.UCSC.hg38

This is the development version of phastCons7way.UCSC.hg38; for the stable release version, see phastCons7way.UCSC.hg38.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1

UCSC phastCons conservation scores for hg38


Bioconductor version: Development (3.24)

Store UCSC phastCons conservation scores for the human genome (hg38) calculated from multiple alignments with other 6 vertebrate species.

Author: Robert Castelo [aut, cre]

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("phastCons7way.UCSC.hg38")):

Robert Castelo. phastCons7way.UCSC.hg38: UCSC phastCons conservation scores for hg38. doi:10.18129/B9.bioc.phastCons7way.UCSC.hg38, R package version 3.7.1, https://bioconductor.org/packages/phastCons7way.UCSC.hg38.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("phastCons7way.UCSC.hg38")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF
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Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version3.7.1
In Bioconductor sinceBioC 3.1 (R-3.2) (11.5 years)
License Artistic-2.0
Depends R (>= 3.0.0), GenomicScores (>= 1.3.19)
Imports utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package phastCons7way.UCSC.hg38_3.7.1.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/phastCons7way.UCSC.hg38/
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