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grasp2db

This is the development version of grasp2db; for the stable release version, see grasp2db.

grasp2db, sqlite wrap of GRASP 2.0


Bioconductor version: Development (3.19)

grasp2db, sqlite wrap of NHLBI GRASP 2.0, an extended GWAS catalog.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("grasp2db")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("grasp2db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("grasp2db")
grasp2db: interface to a high density GWAS catalogue PDF R Script
Notes on Bioconductor's GRASP2 database curation HTML R Script
Reference Manual PDF
README Text
LICENSE Text

Details

biocViews AnnotationData
Version 1.1.0
License Artistic-2.0 + file LICENSE
Depends RSQLite, dplyr, dbplyr
Imports methods, utils, stats, GenomeInfoDb, AnnotationHub, digest
System Requirements
URL
See More
Suggests gwascat, knitr
Linking To
Enhances AnnotationHubData
Depends On Me
Imports Me
Suggests Me AnnotationHubData
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package grasp2db_1.1.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/grasp2db/
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