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geneplast.data

This is the development version of geneplast.data; for the stable release version, see geneplast.data.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12

Input data for the geneplast package via AnnotationHub

DOI: 10.18129/B9.bioc.geneplast.data

Bioconductor version: Development (3.24)

The package geneplast.data provides datasets from different sources via AnnotationHub to use in geneplast pipelines. The datasets have species, phylogenetic trees, and orthology relationships among eukaryotes from different orthologs databases.

Author: Leonardo Campos [aut, cre], Danilo Imparato [aut], Rodrigo Dalmolin [aut], Mauro Castro [aut]

Maintainer: Leonardo Campos <leofields at gmail.com>

Citation (from within R, enter citation("geneplast.data")):

Leonardo Campos, Danilo Imparato, Rodrigo Dalmolin, Mauro Castro. geneplast.data: Input data for the geneplast package via AnnotationHub. doi:10.18129/B9.bioc.geneplast.data, R package version 0.99.9, https://bioconductor.org/packages/geneplast.data.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("geneplast.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneplast.data")

Details

Package Archives

Follow Installation instructions to use this package in your R session.