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TENET.AnnotationHub

This is the development version of TENET.AnnotationHub; for the stable release version, see TENET.AnnotationHub.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20

Annotation data for the TENET package

DOI: 10.18129/B9.bioc.TENET.AnnotationHub

Bioconductor version: Development (3.24)

AnnotationHub package containing datasets for use in the TENET package. Includes GenomicRanges objects representing putative enhancer, promoter, and open chromatin regions. All included datasets are aligned to the hg38 human genome.

Author: Rhie Lab at the University of Southern California [cre], Daniel Mullen [aut] ORCID: 0000-0002-7639-0549 , Zexun Wu [aut] ORCID: 0000-0003-2566-1326 , Ethan Nelson-Moore [aut] ORCID: 0009-0001-6903-9232 , Suhn Rhie [aut] ORCID: 0000-0002-5522-5296

Maintainer: Rhie Lab at the University of Southern California <rhielab at gmail.com>

Citation (from within R, enter citation("TENET.AnnotationHub")):

Daniel Mullen, Zexun Wu, Ethan Nelson-Moore, Suhn Rhie. TENET.AnnotationHub: Annotation data for the TENET package. doi:10.18129/B9.bioc.TENET.AnnotationHub, R package version 1.1.0, https://bioconductor.org/packages/TENET.AnnotationHub.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("TENET.AnnotationHub")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TENET.AnnotationHub")

Details

Package Archives

Follow Installation instructions to use this package in your R session.