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SNPlocs.Hsapiens.dbSNP155.GRCh38

This is the development version of SNPlocs.Hsapiens.dbSNP155.GRCh38; for the stable release version, see SNPlocs.Hsapiens.dbSNP155.GRCh38.

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3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15

Human SNP locations and alleles extracted from dbSNP Build 155 and placed on the GRCh38/hg38 assembly

DOI: 10.18129/B9.bioc.SNPlocs.Hsapiens.dbSNP155.GRCh38

Bioconductor version: Development (3.24)

The 949,021,448 SNPs in this package were extracted from the RefSNP JSON files for chromosomes 1-22, X, Y, and MT, located at https://ftp.ncbi.nih.gov/snp/archive/b155/JSON/ (these files were created by NCBI in May 2021). These SNPs can be "injected" in BSgenome.Hsapiens.NCBI.GRCh38 or BSgenome.Hsapiens.UCSC.hg38.

Author: Hervé Pagès

Maintainer: Hervé Pagès <hpages.on.github at gmail.com>

Citation (from within R, enter citation("SNPlocs.Hsapiens.dbSNP155.GRCh38")):

Hervé Pagès. SNPlocs.Hsapiens.dbSNP155.GRCh38: Human SNP locations and alleles extracted from dbSNP Build 155 and placed on the GRCh38/hg38 assembly. doi:10.18129/B9.bioc.SNPlocs.Hsapiens.dbSNP155.GRCh38, R package version 0.99.24, https://bioconductor.org/packages/SNPlocs.Hsapiens.dbSNP155.GRCh38.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("SNPlocs.Hsapiens.dbSNP155.GRCh38")

For older versions of R, please refer to the appropriate Bioconductor release.

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Follow Installation instructions to use this package in your R session.