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MafDb.gnomAD.r2.1.hs37d5

Minor allele frequency data from gnomAD release 2.1 for hs37d5

Bioconductor version: 3.24 · Package version: 3.10.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

Store minor allele frequency data from the Genome Aggregation Database (gnomAD release 2.1) for the human genome version hs37d5.

DOI: 10.18129/B9.bioc.MafDb.gnomAD.r2.1.hs37d5

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MafDb.gnomAD.r2.1.hs37d5")

Details

MaintainerRobert Castelo <robert.castelo@upf.edu>
AuthorRobert Castelo
LicenseArtistic-2.0
Source branchdevel
biocViewsAnnotationData, Genetics, GenomicScores, Homo_sapiens
Package Short Url https://bioconductor.org/packages/MafDb.gnomAD.r2.1.hs37d5/

Citation

From within R, enter citation("MafDb.gnomAD.r2.1.hs37d5"):

Robert Castelo. MafDb.gnomAD.r2.1.hs37d5: Minor allele frequency data from gnomAD release 2.1 for hs37d5. doi:10.18129/B9.bioc.MafDb.gnomAD.r2.1.hs37d5, R package version 3.10.0, https://bioconductor.org/packages/MafDb.gnomAD.r2.1.hs37d5.

Generated from the package metadata; it may differ from the package's own citation.

Download

Follow the installation instructions to use this package in your R session.

Source packageMafDb.gnomAD.r2.1.hs37d5_3.10.0.tar.gz
Dependencies

Depends: R (>= 3.5.0), GenomicScores (>= 1.9.6)

Imports: utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome

Suggests: SNPlocs.Hsapiens.dbSNP144.GRCh37