JASPAR2018

This is the development version of JASPAR2018; for the stable release version, see JASPAR2018.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6

Data package for JASPAR 2018

Bioconductor version: Development (3.24)

Data package for JASPAR 2018. To search this databases, please use the package TFBSTools (>= 1.15.6).

Author: Ge Tan <ge_tan at live.com>

Maintainer: Ge Tan <ge_tan at live.com>

Citation (from within R, enter citation("JASPAR2018")):

Ge Tan. JASPAR2018: Data package for JASPAR 2018. doi:10.18129/B9.bioc.JASPAR2018, R package version 1.1.1, https://bioconductor.org/packages/JASPAR2018.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("JASPAR2018")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	AnnotationData, FunctionalAnnotation
Version	1.1.1
In Bioconductor since	BioC 3.6 (R-3.4) (9 years)
License	GPL-2
Depends	R (>= 3.4.0), methods
Imports
System Requirements
URL	http://jaspar.genereg.net/

Suggests	TFBSTools (>= 1.15.6)
Linking To
Enhances
Depends On Me
Imports Me	esATAC, primirTSS
Suggests Me	MAGAR, pageRank, TFBSTools
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	JASPAR2018_1.1.1.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url	https://bioconductor.org/packages/JASPAR2018/
Package Downloads Report	Download Stats