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IlluminaHumanMethylationEPICv2manifest

This is the development version of IlluminaHumanMethylationEPICv2manifest; for the stable release version, see IlluminaHumanMethylationEPICv2manifest.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19

Manifest for Illumina's EPIC v2.0 methylation arrays


Bioconductor version: Development (3.24)

A manifest package for Illumina's EPIC v2.0 methylation arrays. The version 2 covers more than 935K CpG sites in the human genome hg38. It is an update of the original EPIC v1.0 array (i.e., the 850K methylation array).

Author: Zuguang Gu [aut, cre] ORCID iD ORCID: 0000-0002-7395-8709

Maintainer: Zuguang Gu <guzuguang at suat-sz.edu.cn>

Citation (from within R, enter citation("IlluminaHumanMethylationEPICv2manifest")):

Zuguang Gu. IlluminaHumanMethylationEPICv2manifest: Manifest for Illumina's EPIC v2.0 methylation arrays. doi:10.18129/B9.bioc.IlluminaHumanMethylationEPICv2manifest, R package version 1.0.1, https://bioconductor.org/packages/IlluminaHumanMethylationEPICv2manifest.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("IlluminaHumanMethylationEPICv2manifest")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IlluminaHumanMethylationEPICv2manifest")
Use of IlluminaHumanMethylationEPICv2manifest HTML R Script
Reference ManualPDF
NEWSText

Details

biocViews AnnotationData, Homo_sapiens, IlluminaChip
Version1.0.1
In Bioconductor sinceBioC 3.19 (R-4.4) (2.5 years)
License Artistic-2.0
Depends R (>= 4.0.0), minfi
Imports utils
System Requirements
URLhttps://www.illumina.com/products/by-type/microarray-kits/infinium-methylation-epic.html
See More
Suggests knitr, IlluminaHumanMethylationEPICmanifest, eulerr
Linking To
Enhances
Depends On Me
Imports Me missMethyl
Suggests Me dnaEPICO
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package IlluminaHumanMethylationEPICv2manifest_1.0.1.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/IlluminaHumanMethylationEPICv2manifest/
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