GeneSummary

This is the development version of GeneSummary; for the stable release version, see GeneSummary.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14

RefSeq Gene Summaries

Bioconductor version: Development (3.24)

This package provides long description of genes collected from the RefSeq database. The text in "COMMENT" section started with "Summary" is extracted as the description of the gene. The long text descriptions can be used for analysis such as text mining.

Author: Zuguang Gu [aut, cre] ORCID: 0000-0002-7395-8709

Maintainer: Zuguang Gu <guzuguang at suat-sz.edu.cn>

Citation (from within R, enter citation("GeneSummary")):

Zuguang Gu. GeneSummary: RefSeq Gene Summaries. doi:10.18129/B9.bioc.GeneSummary, R package version 0.99.7, https://bioconductor.org/packages/GeneSummary.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("GeneSummary")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GeneSummary")

Gene Summaries from RefSeq Database	HTML	R Script
Reference Manual	PDF
NEWS	Text
LICENSE	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	AnnotationData, Homo_sapiens, Organism
Version	0.99.7
In Bioconductor since	BioC 3.14 (R-4.1) (5 years)
License	MIT + file LICENSE
Depends	R (>= 4.0)
Imports
System Requirements
URL	https://github.com/jokergoo/GeneSummary
Bug Reports	https://github.com/jokergoo/GeneSummary/issues

Suggests	knitr, rmarkdown, markdown, testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	GeneSummary_0.99.7.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url	https://bioconductor.org/packages/GeneSummary/
Package Downloads Report	Download Stats