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BSgenome.Vvinifera.URGI.IGGP12Xv2

This is the development version of BSgenome.Vvinifera.URGI.IGGP12Xv2; for the stable release version, see BSgenome.Vvinifera.URGI.IGGP12Xv2.

Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (IGGP version 12Xv2)


Bioconductor version: Development (3.19)

Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (derived from Pinot Noir and close to homozygosity after 6-9 rounds of selfing) as assembled by the IGGP (version 12Xv2) and available at the URGI (INRA)

Author: Timothee Flutre [cre,aut]

Maintainer: Timothee Flutre <timothee.flutre at supagro.inra.fr>

Citation (from within R, enter citation("BSgenome.Vvinifera.URGI.IGGP12Xv2")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BSgenome.Vvinifera.URGI.IGGP12Xv2")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews AnnotationData, BSgenome, Genetics, Vitis_vinifera
Version 0.1
License CC0
Depends BSgenome(>= 1.38.0)
Imports BSgenome
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Vvinifera.URGI.IGGP12Xv2_0.1.tar.gz
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Package Short Url https://bioconductor.org/packages/BSgenome.Vvinifera.URGI.IGGP12Xv2/
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