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BSgenome.Hsapiens.UCSC.hg18

This is the development version of BSgenome.Hsapiens.UCSC.hg18; for the stable release version, see BSgenome.Hsapiens.UCSC.hg18.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Full genome sequences for Homo sapiens (UCSC version hg18)


Bioconductor version: Development (3.24)

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg18, Mar. 2006) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Hsapiens.UCSC.hg18")):

The Bioconductor Dev Team. BSgenome.Hsapiens.UCSC.hg18: Full genome sequences for Homo sapiens (UCSC version hg18). doi:10.18129/B9.bioc.BSgenome.Hsapiens.UCSC.hg18, R package version 1.3.1000, https://bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg18.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("BSgenome.Hsapiens.UCSC.hg18")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF

Details

biocViews AnnotationData, BSgenome, Genetics, Homo_sapiens
Version1.3.1000
In Bioconductor sinceBioC 2.5 (R-2.10) or earlier (> 17 years)
License Artistic-2.0
Depends BSgenome (>= 1.33.5)
Imports BSgenome
System Requirements
URL
See More
Suggests TxDb.Hsapiens.UCSC.hg18.knownGene
Linking To
Enhances
Depends On Me BSgenome.Hsapiens.UCSC.hg18.masked
Imports Me BSgenome.Hsapiens.UCSC.hg18.masked, VanillaICE
Suggests Me Biostrings, CAGEr, ListerEtAlBSseq, MEDME, methylPipe, MinimumDistance, oligo
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Hsapiens.UCSC.hg18_1.3.1000.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg18/
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