AHPubMedDbs
SQLites, tibbles, and data.tables for AnnotationHub
Bioconductor version: 3.24 · Package version: 1.8.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Supplies AnnotationHub with some preprocessed sqlite, tibble, and data.table datasets of PubMed. All the datasets are generated by our Snakemake workflow [pubmed-workflow](https://github.com/rikenbit/pubmed-workflow). For the details, see the README.md of pubmed-workflow.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("AHPubMedDbs")Details
| Maintainer | Koki Tsuyuzaki <k.t.the-answer@hotmail.co.jp> |
| Author | Koki Tsuyuzaki [aut, cre], Manabu Ishii [aut], Itoshi Nikaido [aut] |
| License | Artistic-2.0 |
| Bug Reports | https://github.com/rikenbit/AHPubMedDbs/issues |
| Source branch | devel |
| biocViews | AnnotationData, AnnotationHub |
| Package Short Url | https://bioconductor.org/packages/AHPubMedDbs/ |
Citation
From within R, enter citation("AHPubMedDbs"):
Koki Tsuyuzaki, Manabu Ishii, Itoshi Nikaido. AHPubMedDbs: SQLites, tibbles, and data.tables for AnnotationHub. doi:10.18129/B9.bioc.AHPubMedDbs, R package version 1.8.0, https://bioconductor.org/packages/AHPubMedDbs.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | AHPubMedDbs_1.8.0.tar.gz |