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AHMeSHDbs

This is the development version of AHMeSHDbs; for the stable release version, see AHMeSHDbs.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13

MeSHDbs for AnnotationHub


Bioconductor version: Development (3.24)

Supplies AnnotationHub with `MeSHDb` NIH MeSH annotation databases for many species. All the SQLite files and metadata.csv are generated by our Snakemake workflow [mesh-workflow](https://github.com/rikenbit/mesh-workflow).

Author: Koki Tsuyuzaki [aut, cre], Manabu Ishii [aut], Itoshi Nikaido [aut]

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("AHMeSHDbs")):

Koki Tsuyuzaki, Manabu Ishii, Itoshi Nikaido. AHMeSHDbs: MeSHDbs for AnnotationHub. doi:10.18129/B9.bioc.AHMeSHDbs, R package version 1.8.0, https://bioconductor.org/packages/AHMeSHDbs.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("AHMeSHDbs")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AHMeSHDbs")
Provide MeSHDb databases for AnnotationHub HTML R Script
Reference ManualPDF
NEWSText

Details

biocViews AnnotationData, AnnotationHub, FunctionalAnnotation, MeSHDb
Version1.8.0
In Bioconductor sinceBioC 3.13 (R-4.1) (5.5 years)
License Artistic-2.0
Depends R (>= 4.1.0)
Imports AnnotationHub (>= 2.22.0)
System Requirements
URL
Bug Reportshttps://github.com/rikenbit/AHMeSHDbs/issues
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Suggests BiocStyle, knitr, rmarkdown
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package AHMeSHDbs_1.8.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/AHMeSHDbs/
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