splots

DOI: 10.18129/B9.bioc.splots  

This is the development version of splots; for the stable release version, see splots.

Visualization of high-throughput assays in microtitre plate or slide format

Bioconductor version: Development (3.19)

This package is here to support legacy usages of it, but it should not be used for new code development. It provides a single function, plotScreen, for visualising data in microtitre plate or slide format. As a better alternative for such functionality, please consider the platetools package on CRAN (https://cran.r-project.org/package=platetools and https://github.com/Swarchal/platetools), or ggplot2 (geom_raster, facet_wrap) as exemplified in the vignette of this package.

Author: Wolfgang Huber, Oleg Sklyar

Maintainer: Wolfgang Huber <wolfgang.huber at embl.org>

Installation

To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("splots")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("splots")

 

HTML	R Script	splots: visualization of data from assays in microtitre plate or slide format
PDF		Reference Manual

Details

biocViews	MicrotitrePlateAssay, Sequencing, Software, Visualization
Version	1.69.0
In Bioconductor since	BioC 1.9 (R-2.4) (17 years)
License	LGPL
Depends
Imports	grid, RColorBrewer
LinkingTo
Suggests	BiocStyle, knitr, rmarkdown, assertthat, HD2013SGI, dplyr, ggplot2
SystemRequirements
Enhances
URL
Depends On Me	cellHTS2, HD2013SGI
Imports Me	RNAinteract
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	splots_1.69.0.tar.gz
Windows Binary	splots_1.69.0.zip
macOS Binary (x86_64)	splots_1.69.0.tgz
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/splots
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/splots
Bioc Package Browser	https://code.bioconductor.org/browse/splots/
Package Short Url	https://bioconductor.org/packages/splots/
Package Downloads Report	Download Stats