rTRMui
This is the development version of rTRMui; for the stable release version, see rTRMui.
A shiny user interface for rTRM
Bioconductor version: Development (3.19)
This package provides a web interface to compute transcriptional regulatory modules with rTRM.
Author: Diego Diez
Maintainer: Diego Diez <diego10ruiz at gmail.com>
Citation (from within R, enter
citation("rTRMui")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("rTRMui")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | GUI, GeneRegulation, GraphAndNetwork, Network, Software, Transcription |
| Version | 1.41.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (10.5 years) |
| License | GPL-3 |
| Depends | |
| Imports | shiny (>= 0.9), rTRM, MotifDb, org.Hs.eg.db, org.Mm.eg.db |
| System Requirements | |
| URL | https://github.com/ddiez/rTRMui |
| Bug Reports | https://github.com/ddiez/rTRMui/issues |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/rTRMui |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/rTRMui |
| Package Short Url | https://bioconductor.org/packages/rTRMui/ |
| Package Downloads Report | Download Stats |