keggorthology
This is the development version of keggorthology; for the stable release version, see keggorthology.
graph support for KO, KEGG Orthology
Bioconductor version: Development (3.20)
graphical representation of the Feb 2010 KEGG Orthology. The KEGG orthology is a set of pathway IDs that are not to be confused with the KEGG ortholog IDs.
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: VJ Carey <stvjc at channing.harvard.edu>
citation("keggorthology")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("keggorthology")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("keggorthology")
keggorthology overview | R Script | |
Reference Manual |
Details
biocViews | GraphAndNetwork, KEGG, Pathways, Software, Visualization |
Version | 2.57.0 |
In Bioconductor since | BioC 2.6 (R-2.11) (14.5 years) |
License | Artistic-2.0 |
Depends | R (>= 2.5.0), stats, graph, hgu95av2.db |
Imports | AnnotationDbi, graph, DBI, graph, grDevices, methods, stats, tools, utils |
System Requirements | |
URL |
See More
Suggests | RBGL, ALL |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | MLInterfaces |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | keggorthology_2.57.0.tar.gz |
Windows Binary | keggorthology_2.57.0.zip |
macOS Binary (x86_64) | keggorthology_2.57.0.tgz |
macOS Binary (arm64) | keggorthology_2.57.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/keggorthology |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/keggorthology |
Bioc Package Browser | https://code.bioconductor.org/browse/keggorthology/ |
Package Short Url | https://bioconductor.org/packages/keggorthology/ |
Package Downloads Report | Download Stats |