impute

This is the development version of impute; for the stable release version, see impute.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

impute: Imputation for microarray data

Bioconductor version: Development (3.24)

Imputation for microarray data (currently KNN only)

Author: Trevor Hastie, Robert Tibshirani, Balasubramanian Narasimhan, Gilbert Chu

Maintainer: Balasubramanian Narasimhan <naras at stat.Stanford.EDU>

Citation (from within R, enter citation("impute")):

Trevor Hastie, Robert Tibshirani, Balasubramanian Narasimhan, Gilbert Chu. impute: impute: Imputation for microarray data. doi:10.18129/B9.bioc.impute, R package version 1.87.0, https://bioconductor.org/packages/impute.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("impute")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Microarray, Software
Version	1.87.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 21.5 years)
License	GPL-2
Depends	R (>= 2.10)
Imports
System Requirements
URL

Suggests
Linking To
Enhances
Depends On Me	AMARETTO, CGHcall, curatedBreastData, imputeLCMD, moduleColor, swamp, TIN
Imports Me	biscuiteer, BreastSubtypeR, ChAMP, cola, DExMA, DIscBIO, doppelgangR, EGAD, ENmix, ePCR, EpiMix, fastLiquidAssociation, genefu, genomation, GSEMA, iC10, iModMix, lilikoi, MAGAR, MatrixQCvis, MEAT, MetaGxBreast, MetaGxOvarian, MetaGxPancreas, metamorphr, MethylMix, mi4p, miRLAB, MSnbase, netboost, PCAPAM50, Pigengene, PINSPlus, pmp, POMA, QFeaturesGUI, REMP, RNAAgeCalc, Rnits, Rnmr1D, samr, spammR, speaq, specmine, statTarget, WGCNA
Suggests Me	BioNet, DAPAR, DaparToolshed, GeoTcgaData, graphite, GSA, LIPIDIFy, maGUI, metabodecon, metabodeconplus, MethPed, methylclock, MsCoreUtils, QFeatures, qmtools, RnBeads, romic, scp, TBSignatureProfiler, TCGAutils, tidyexposomics
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	impute_1.87.0.tar.gz
Windows Binary (x86_64)	impute_1.87.0.zip (64-bit only)
macOS Binary (big-sur-x86_64)	impute_1.87.0.tgz
macOS Binary (sonoma-arm64)	impute_1.87.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/impute
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/impute
Package Short Url	https://bioconductor.org/packages/impute/
Package Downloads Report	Download Stats