iSEEhex

This is the development version of iSEEhex; for the stable release version, see iSEEhex.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16

iSEE extension for summarising data points in hexagonal bins

Bioconductor version: Development (3.24)

This package provides panels summarising data points in hexagonal bins for `iSEE`. It is part of `iSEEu`, the iSEE universe of panels that extend the `iSEE` package.

Author: Kevin Rue-Albrecht [aut, cre] ORCID: 0000-0003-3899-3872 , Charlotte Soneson [aut] ORCID: 0000-0003-3833-2169 , Federico Marini [aut] ORCID: 0000-0003-3252-7758 , Aaron Lun [aut] ORCID: 0000-0002-3564-4813

Maintainer: Kevin Rue-Albrecht <kevinrue67 at gmail.com>

Citation (from within R, enter citation("iSEEhex")):

Kevin Rue-Albrecht, Charlotte Soneson, Federico Marini, Aaron Lun. iSEEhex: iSEE extension for summarising data points in hexagonal bins. doi:10.18129/B9.bioc.iSEEhex, R package version 1.15.0, https://bioconductor.org/packages/iSEEhex.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("iSEEhex")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iSEEhex")

The iSEEhex package	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Infrastructure, Software
Version	1.15.0
In Bioconductor since	BioC 3.16 (R-4.2) (4 years)
License	Artistic-2.0
Depends	SummarizedExperiment, iSEE
Imports	ggplot2, hexbin, methods, shiny
System Requirements
URL	https://github.com/iSEE/iSEEhex
Bug Reports	https://support.bioconductor.org/t/iSEEhex

Suggests	BiocStyle, covr, knitr, RefManageR, rmarkdown, sessioninfo, testthat (>= 3.0.0), scRNAseq, scater
Linking To
Enhances
Depends On Me	iSEEu
Imports Me
Suggests Me
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	iSEEhex_1.15.0.tar.gz
Windows Binary (x86_64)	iSEEhex_1.15.0.zip (64-bit only)
macOS Binary (big-sur-x86_64)	iSEEhex_1.15.0.tgz
macOS Binary (sonoma-arm64)	iSEEhex_1.15.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/iSEEhex
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/iSEEhex
Package Short Url	https://bioconductor.org/packages/iSEEhex/
Package Downloads Report	Download Stats