• Home
• Bioconductor 3.24
• Software Packages
• graper (development version)

graper

This is the development version of graper; for the stable release version, see graper.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9

Adaptive penalization in high-dimensional regression and classification with external covariates using variational Bayes

DOI: 10.18129/B9.bioc.graper

Bioconductor version: Development (3.24)

This package enables regression and classification on high-dimensional data with different relative strengths of penalization for different feature groups, such as different assays or omic types. The optimal relative strengths are chosen adaptively. Optimisation is performed using a variational Bayes approach.

Author: Britta Velten [aut, cre], Wolfgang Huber [aut]

Maintainer: Britta Velten <britta.velten at gmail.com>

Citation (from within R, enter citation("graper")):

Britta Velten, Wolfgang Huber. graper: Adaptive penalization in high-dimensional regression and classification with external covariates using variational Bayes. doi:10.18129/B9.bioc.graper, R package version 1.29.0, https://bioconductor.org/packages/graper.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("graper")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("graper")

Details

Package Archives

Follow Installation instructions to use this package in your R session.