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This is the development version of gg4way; for the stable release version, see gg4way.

4way Plots of Differential Expression

Bioconductor version: Development (3.19)

4way plots enable a comparison of the logFC values from two contrasts of differential gene expression. The gg4way package creates 4way plots using the ggplot2 framework and supports popular Bioconductor objects. The package also provides information about the correlation between contrasts and significant genes of interest.

Author: Benjamin I Laufer [aut, cre], Brad A Friedman [aut]

Maintainer: Benjamin I Laufer <blaufer at>

Citation (from within R, enter citation("gg4way")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

gg4way HTML R Script
Reference Manual PDF


biocViews DifferentialExpression, GeneExpression, RNASeq, Sequencing, SingleCell, Software, Transcription, Visualization
Version 1.1.2
In Bioconductor since BioC 3.18 (R-4.3) (< 6 months)
License MIT + file LICENSE
Depends R (>= 4.3.0), ggplot2
Imports DESeq2, dplyr, edgeR, ggrepel, glue, janitor, limma, magrittr, methods, purrr, rlang, scales, stats, stringr, tibble, tidyr
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Suggests airway, BiocStyle, knitr,, rmarkdown, testthat
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Follow Installation instructions to use this package in your R session.

Source Package gg4way_1.1.2.tar.gz
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macOS Binary (x86_64) gg4way_1.1.2.tgz
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