diffcoexp
This is the development version of diffcoexp; for the stable release version, see diffcoexp.
All Bioconductor versions of diffcoexp
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7
Differential Co-expression Analysis
Bioconductor version: 3.24 · Package version: 1.33.0
A tool for the identification of differentially coexpressed links (DCLs) and differentially coexpressed genes (DCGs). DCLs are gene pairs with significantly different correlation coefficients under two conditions. DCGs are genes with significantly more DCLs than by chance.
Author: Wenbin Wei, Sandeep Amberkar, Winston Hide
Maintainer: Wenbin Wei <wenbin.wei2 at durham.ac.uk>
Citation
From within R, enter citation("diffcoexp"):
Wenbin Wei, Sandeep Amberkar, Winston Hide. diffcoexp: Differential Co-expression Analysis. doi:10.18129/B9.bioc.diffcoexp, R package version 1.33.0, https://bioconductor.org/packages/diffcoexp.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("diffcoexp")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.33.0 |
| License | GPL (>2) |
| URL | https://github.com/hidelab/diffcoexp |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.7 (R-3.5) (8 years) |
| Downloads rank | 1630 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Coverage, DifferentialExpression, GeneExpression, ImmunoOncology, Microarray, OneChannel, RNASeq, Sequencing, Software, Transcription, TwoChannel |
| Package Short Url | https://bioconductor.org/packages/diffcoexp/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("diffcoexp")| About diffcoexp | R Script | |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | diffcoexp_1.33.0.tar.gz |
| Windows binary (x86_64) | diffcoexp_1.33.0.zip |
| macOS binary (arm64) | diffcoexp_1.33.0.tgz |
| macOS binary (x86_64) | diffcoexp_1.33.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/diffcoexp |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/diffcoexp |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 3.5), WGCNA, SummarizedExperiment
Imports: stats, DiffCorr, psych, igraph, BiocGenerics
Reverse dependencies
Imports Me (1): ExpHunterSuite