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cytolib

This is the development version of cytolib; for the stable release version, see cytolib.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6

C++ infrastructure for representing and interacting with the gated cytometry data


Bioconductor version: Development (3.24)

This package provides the core data structure and API to represent and interact with the gated cytometry data.

Author: Mike Jiang

Maintainer: Mike Jiang <mike at ozette.com>

Citation (from within R, enter citation("cytolib")):

Mike Jiang. cytolib: C++ infrastructure for representing and interacting with the gated cytometry data. doi:10.18129/B9.bioc.cytolib, R package version 2.25.0, https://bioconductor.org/packages/cytolib.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("cytolib")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cytolib")
Using cytolib HTML R Script
Reference ManualPDF
LICENSEText

Details

biocViews DataImport, DataRepresentation, FlowCytometry, ImmunoOncology, Preprocessing, Software
Version2.25.0
In Bioconductor sinceBioC 3.6 (R-3.4) (9 years)
License AGPL-3.0-only
Depends R (>= 3.4)
Imports RProtoBufLib
System RequirementsGNU make, C++11
URL
See More
Suggests knitr, rmarkdown
Linking To BH (>= 1.84.0.0), RProtoBufLib (>= 2.13.1), Rhdf5lib
Enhances
Depends On Me
Imports Me CytoML, flowCore, flowWorkspace
Suggests Me
Links To Me CytoML, flowCore, flowWorkspace
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package cytolib_2.25.0.tar.gz
Windows Binary (x86_64) cytolib_2.25.0.zip (64-bit only)
macOS Binary (big-sur-x86_64) cytolib_2.25.0.tgz
macOS Binary (sonoma-arm64) cytolib_2.25.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/cytolib
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/cytolib
Package Short Url https://bioconductor.org/packages/cytolib/
Package Downloads ReportDownload Stats