DOI: 10.18129/B9.bioc.bnbc    

This is the development version of bnbc; for the stable release version, see bnbc.

Bandwise normalization and batch correction of Hi-C data

Bioconductor version: Development (3.9)

Tools to normalize (several) Hi-C data from replicates.

Author: Kipper Fletez-Brant [cre, aut], Kasper Daniel Hansen [aut]

Maintainer: Kipper Fletez-Brant <cafletezbrant at>

Citation (from within R, enter citation("bnbc")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("bnbc", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script bnbc User's Guide
PDF   Reference Manual
Text   NEWS


biocViews HiC, Normalization, Preprocessing, Software
Version 1.5.0
In Bioconductor since BioC 3.6 (R-3.4) (1.5 years)
License Artistic-2.0
Depends R (>= 3.4.0), methods, BiocGenerics, SummarizedExperiment, GenomicRanges
Imports Rcpp (>= 0.12.12), IRanges, GenomeInfoDb, S4Vectors, matrixStats, preprocessCore, sva, parallel, EBImage, utils
LinkingTo Rcpp
Suggests BiocStyle, knitr, rmarkdown, RUnit
Depends On Me
Imports Me
Suggests Me
Links To Me
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Follow Installation instructions to use this package in your R session.

Source Package bnbc_1.5.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan) bnbc_1.5.0.tgz
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