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a4Preproc

This is the development version of a4Preproc; for the stable release version, see a4Preproc.

Automated Affymetrix Array Analysis Preprocessing Package


Bioconductor version: Development (3.19)

Utility functions to pre-process data for the Automated Affymetrix Array Analysis set of packages.

Author: Willem Talloen [aut], Tobias Verbeke [aut], Laure Cougnaud [cre]

Maintainer: Laure Cougnaud <laure.cougnaud at openanalytics.eu>

Citation (from within R, enter citation("a4Preproc")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("a4Preproc")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("a4Preproc")
a4Preproc package HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews Microarray, Preprocessing, Software
Version 1.51.0
In Bioconductor since BioC 2.8 (R-2.13) (13 years)
License GPL-3
Depends
Imports BiocGenerics, Biobase
System Requirements
URL
See More
Suggests ALL, hgu95av2.db, knitr, rmarkdown
Linking To
Enhances
Depends On Me a4, a4Base, a4Classif
Imports Me
Suggests Me graphite
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package a4Preproc_1.51.0.tar.gz
Windows Binary a4Preproc_1.51.0.zip
macOS Binary (x86_64) a4Preproc_1.51.0.tgz
macOS Binary (arm64) a4Preproc_1.51.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/a4Preproc
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/a4Preproc
Bioc Package Browser https://code.bioconductor.org/browse/a4Preproc/
Package Short Url https://bioconductor.org/packages/a4Preproc/
Package Downloads Report Download Stats