a4Classif

This is the development version of a4Classif; for the stable release version, see a4Classif.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8

Automated Affymetrix Array Analysis Classification Package

Bioconductor version: Development (3.24)

Functionalities for classification of Affymetrix microarray data, integrating within the Automated Affymetrix Array Analysis set of packages.

Author: Willem Talloen [aut], Tobias Verbeke [aut], Laure Cougnaud [cre]

Maintainer: Laure Cougnaud <laure.cougnaud at openanalytics.eu>

Citation (from within R, enter citation("a4Classif")):

Willem Talloen, Tobias Verbeke. a4Classif: Automated Affymetrix Array Analysis Classification Package. doi:10.18129/B9.bioc.a4Classif, R package version 1.61.0, https://bioconductor.org/packages/a4Classif.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("a4Classif")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("a4Classif")

Vignette of the a4Classif package	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Classification, GeneExpression, Microarray, Software
Version	1.61.0
In Bioconductor since	BioC 2.8 (R-2.13) (15.5 years)
License	GPL-3
Depends	a4Core, a4Preproc
Imports	methods, Biobase, ROCR, pamr, glmnet, varSelRF, utils, graphics, stats
System Requirements
URL

Suggests	ALL, hgu95av2.db, knitr, rmarkdown
Linking To
Enhances
Depends On Me	a4
Imports Me
Suggests Me
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	a4Classif_1.61.0.tar.gz
Windows Binary (x86_64)	a4Classif_1.61.0.zip
macOS Binary (big-sur-x86_64)	a4Classif_1.61.0.tgz
macOS Binary (sonoma-arm64)	a4Classif_1.61.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/a4Classif
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/a4Classif
Package Short Url	https://bioconductor.org/packages/a4Classif/
Package Downloads Report	Download Stats