UNDO
This is the development version of UNDO; for the stable release version, see UNDO.
Unsupervised Deconvolution of Tumor-Stromal Mixed Expressions
Bioconductor version: Development (3.20)
UNDO is an R package for unsupervised deconvolution of tumor and stromal mixed expression data. It detects marker genes and deconvolutes the mixing expression data without any prior knowledge.
Author: Niya Wang <wangny at vt.edu>
Maintainer: Niya Wang <wangny at vt.edu>
citation("UNDO")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("UNDO")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("UNDO")
UNDO Usage | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | Software |
Version | 1.47.0 |
In Bioconductor since | BioC 2.14 (R-3.1) (10.5 years) |
License | GPL-2 |
Depends | R (>= 2.15.2), methods, BiocGenerics, Biobase |
Imports | MASS, boot, nnls, stats, utils |
System Requirements | |
URL |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | UNDO_1.47.0.tar.gz |
Windows Binary (x86_64) | UNDO_1.47.0.zip |
macOS Binary (x86_64) | UNDO_1.47.0.tgz |
macOS Binary (arm64) | UNDO_1.47.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/UNDO |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/UNDO |
Bioc Package Browser | https://code.bioconductor.org/browse/UNDO/ |
Package Short Url | https://bioconductor.org/packages/UNDO/ |
Package Downloads Report | Download Stats |