• Home
• Bioconductor 3.24
• Software Packages
• TreeAndLeaf (development version)

TreeAndLeaf

This is the development version of TreeAndLeaf; for the stable release version, see TreeAndLeaf.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11

Displaying binary trees with focus on dendrogram leaves

DOI: 10.18129/B9.bioc.TreeAndLeaf

Bioconductor version: Development (3.24)

TreeAndLeaf implements a hybrid layout strategy that enhances leaf-level visualization in dendrograms. By integrating force-directed graph and tree layout algorithms, it enables projection of multiple layers of information onto graph–tree diagrams.

Author: Milena Cardoso [aut], Luis Rizzardi [aut], Leonardo Kume [aut], Sheyla Trefflich [ctb], Clarice Groeneveld [ctb], Mauro Castro [aut, cre] ORCID: 0000-0003-4942-8131

Maintainer: Mauro Castro <mauro.a.castro at gmail.com>

Citation (from within R, enter citation("TreeAndLeaf")):

Milena Cardoso, Luis Rizzardi, Leonardo Kume, Mauro Castro. TreeAndLeaf: Displaying binary trees with focus on dendrogram leaves. doi:10.18129/B9.bioc.TreeAndLeaf, R package version 1.25.0, https://bioconductor.org/packages/TreeAndLeaf.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("TreeAndLeaf")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TreeAndLeaf")

Details

Package Archives

Follow Installation instructions to use this package in your R session.