TileDBArray
This is the development version of TileDBArray; for the stable release version, see TileDBArray.
All Bioconductor versions of TileDBArray
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12
Using TileDB as a DelayedArray Backend
Bioconductor version: 3.24 · Package version: 1.23.0
Implements a DelayedArray backend for reading and writing dense or sparse arrays in the TileDB format. The resulting TileDBArrays are compatible with all Bioconductor pipelines that can accept DelayedArray instances.
Author: Aaron Lun [aut, cre], Genentech, Inc. [cph]
Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>
Citation
From within R, enter citation("TileDBArray"):
Aaron Lun. TileDBArray: Using TileDB as a DelayedArray Backend. doi:10.18129/B9.bioc.TileDBArray, R package version 1.23.0, https://bioconductor.org/packages/TileDBArray.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("TileDBArray")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.23.0 |
| License | MIT + file LICENSE |
| URL | https://github.com/LTLA/TileDBArray |
| Bug Reports | https://github.com/LTLA/TileDBArray |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.12 (R-4.0) (5 years) |
| Downloads rank | 1615 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | DataRepresentation, Infrastructure, Software |
| Package Short Url | https://bioconductor.org/packages/TileDBArray/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("TileDBArray")| A DelayedArray backend for TileDB | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | TileDBArray_1.23.0.tar.gz |
| Windows binary (x86_64) | TileDBArray_1.23.0.zip |
| macOS binary (arm64) | TileDBArray_1.23.0.tgz |
| macOS binary (x86_64) | TileDBArray_1.23.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/TileDBArray |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/TileDBArray |
| Package Downloads Report | Download Stats |
Dependencies
Depends: SparseArray (>= 1.5.20), DelayedArray (>= 0.31.7)
Imports: methods, tiledb, S4Vectors
Suggests: knitr, Matrix, rmarkdown, BiocStyle, BiocParallel, testthat