TRESS
This is the development version of TRESS; for the stable release version, see TRESS.
All Bioconductor versions of TRESS
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14
Toolbox for mRNA epigenetics sequencing analysis
Bioconductor version: 3.24 · Package version: 1.19.0
This package is devoted to analyzing MeRIP-seq data. Current functionalities include 1. detect transcriptome wide m6A methylation regions 2. detect transcriptome wide differential m6A methylation regions.
Author: Zhenxing Guo [aut, cre], Hao Wu [ctb]
Maintainer: Zhenxing Guo <guozhenxing at cuhk.edu.cn>
Citation
From within R, enter citation("TRESS"):
Zhenxing Guo. TRESS: Toolbox for mRNA epigenetics sequencing analysis. doi:10.18129/B9.bioc.TRESS, R package version 1.19.0, https://bioconductor.org/packages/TRESS.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("TRESS")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.19.0 |
| License | GPL-3 + file LICENSE |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.14 (R-4.1) (4 years) |
| Downloads rank | 1496 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | DifferentialMethylation, Epigenetics, PeakDetection, RNASeq, Software |
| Package Short Url | https://bioconductor.org/packages/TRESS/ |
Documentation
| Reference Manual | |
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | TRESS_1.19.0.tar.gz |
| Windows binary (x86_64) | TRESS_1.19.0.zip |
| macOS binary (arm64) | TRESS_1.19.0.tgz |
| macOS binary (x86_64) | TRESS_1.19.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/TRESS |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/TRESS |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 4.1.0), parallel, S4Vectors
Imports: utils, rtracklayer, Matrix, matrixStats, stats, methods, graphics, GenomicRanges, GenomicFeatures, IRanges, Rsamtools, AnnotationDbi
Reverse dependencies
Imports Me (1): magpie