RTopper
This is the development version of RTopper; for the stable release version, see RTopper.
This package is designed to perform Gene Set Analysis across multiple genomic platforms
Bioconductor version: Development (3.20)
the RTopper package is designed to perform and integrate gene set enrichment results across multiple genomic platforms.
Author: Luigi Marchionni <marchion at jhu.edu>, Svitlana Tyekucheva <svitlana at jimmy.harvard.edu>
Maintainer: Luigi Marchionni <marchion at jhu.edu>
citation("RTopper")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("RTopper")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RTopper")
RTopper user's manual | R Script | |
Reference Manual | ||
LICENSE | Text |
Details
biocViews | Microarray, Software |
Version | 1.51.0 |
In Bioconductor since | BioC 2.9 (R-2.14) (13 years) |
License | GPL (>= 3) + file LICENSE |
Depends | R (>= 2.12.0), Biobase |
Imports | limma, multtest |
System Requirements | |
URL |
See More
Suggests | org.Hs.eg.db, KEGGREST, GO.db |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | RTopper_1.51.0.tar.gz |
Windows Binary | RTopper_1.51.0.zip |
macOS Binary (x86_64) | RTopper_1.51.0.tgz |
macOS Binary (arm64) | RTopper_1.51.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/RTopper |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/RTopper |
Bioc Package Browser | https://code.bioconductor.org/browse/RTopper/ |
Package Short Url | https://bioconductor.org/packages/RTopper/ |
Package Downloads Report | Download Stats |