RPA

DOI: 10.18129/B9.bioc.RPA  

This is the development version of RPA; for the stable release version, see RPA.

RPA: Robust Probabilistic Averaging for probe-level analysis

Bioconductor version: Development (3.18)

Probabilistic analysis of probe reliability and differential gene expression on short oligonucleotide arrays.

Author: Leo Lahti [aut, cre]

Maintainer: Leo Lahti <leo.lahti at iki.fi>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("RPA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	GeneExpression, Microarray, Preprocessing, QualityControl, Software
Version	1.57.0
In Bioconductor since	BioC 2.5 (R-2.10) (13.5 years)
License	BSD_2_clause + file LICENSE
Depends	R (>= 3.1.1), affy, BiocGenerics, BiocStyle, methods, rmarkdown
Imports	phyloseq
LinkingTo
Suggests	knitr, parallel
SystemRequirements
Enhances
URL	https://github.com/antagomir/RPA
BugReports	https://github.com/antagomir/RPA
Depends On Me	prebs
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS Binary (x86_64)	RPA_1.57.0.tgz
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/RPA
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/RPA
Bioc Package Browser	https://code.bioconductor.org/browse/RPA/
Package Short Url	https://bioconductor.org/packages/RPA/
Package Downloads Report	Download Stats