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RNAmodR.RiboMethSeq

This is the development version of RNAmodR.RiboMethSeq; for the stable release version, see RNAmodR.RiboMethSeq.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10

Detection of 2'-O methylations by RiboMethSeq

DOI: 10.18129/B9.bioc.RNAmodR.RiboMethSeq

Bioconductor version: Development (3.24)

RNAmodR.RiboMethSeq implements the detection of 2'-O methylations on RNA from experimental data generated with the RiboMethSeq protocol. The package builds on the core functionality of the RNAmodR package to detect specific patterns of the modifications in high throughput sequencing data.

Author: Felix G.M. Ernst [aut, cre] ORCID: 0000-0001-5064-0928 , Denis L.J. Lafontaine [ctb, fnd]

Maintainer: Felix G.M. Ernst <felix.gm.ernst at outlook.com>

Citation (from within R, enter citation("RNAmodR.RiboMethSeq")):

Felix G.M. Ernst. RNAmodR.RiboMethSeq: Detection of 2'-O methylations by RiboMethSeq. doi:10.18129/B9.bioc.RNAmodR.RiboMethSeq, R package version 1.27.0, https://bioconductor.org/packages/RNAmodR.RiboMethSeq.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("RNAmodR.RiboMethSeq")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RNAmodR.RiboMethSeq")

Details

Package Archives

Follow Installation instructions to use this package in your R session.