R4RNA
This is the development version of R4RNA; for the stable release version, see R4RNA.
All Bioconductor versions of R4RNA
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3
An R package for RNA visualization and analysis
Bioconductor version: 3.24 · Package version: 1.41.0
A package for RNA basepair analysis, including the visualization of basepairs as arc diagrams for easy comparison and annotation of sequence and structure. Arc diagrams can additionally be projected onto multiple sequence alignments to assess basepair conservation and covariation, with numerical methods for computing statistics for each.
Author: Daniel Lai, Irmtraud Meyer <irmtraud.meyer at cantab.net>
Maintainer: Daniel Lai <jujubix at cs.ubc.ca>
Citation
From within R, enter citation("R4RNA"):
Daniel Lai, Irmtraud Meyer. R4RNA: An R package for RNA visualization and analysis. doi:10.18129/B9.bioc.R4RNA, R package version 1.41.0, https://bioconductor.org/packages/R4RNA.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("R4RNA")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.41.0 |
| License | GPL-3 |
| URL | http://www.e-rna.org/r-chie/ |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.3 (R-3.3) (10 years) |
| Downloads rank | 320 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Alignment, DataImport, DataRepresentation, MultipleComparison, MultipleSequenceAlignment, Preprocessing, Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/R4RNA/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("R4RNA")| R4RNA | R Script | |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | R4RNA_1.41.0.tar.gz |
| Windows binary (x86_64) | R4RNA_1.41.0.zip |
| macOS binary (arm64) | R4RNA_1.41.0.tgz |
| macOS binary (x86_64) | R4RNA_1.41.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/R4RNA |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/R4RNA |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 3.2.0), Biostrings (>= 2.38.0)