DOI: 10.18129/B9.bioc.PREDA    

This is the development version of PREDA; for the stable release version, see PREDA.

Position Related Data Analysis

Bioconductor version: Development (3.9)

Package for the position related analysis of quantitative functional genomics data.

Author: Francesco Ferrari < at>

Maintainer: Francesco Ferrari < at>

Citation (from within R, enter citation("PREDA")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("PREDA", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF PREDA S4-classes
PDF R Script PREDA tutorial
PDF   Reference Manual


biocViews CopyNumberVariation, GeneExpression, Genetics, Software
Version 1.29.0
In Bioconductor since BioC 2.9 (R-2.14) (7.5 years)
License GPL-2
Depends R (>= 2.9.0), Biobase, lokern (>= 1.0.9), multtest, stats, methods, annotate
Suggests quantsmooth, qvalue, limma, caTools, affy, PREDAsampledata
Enhances Rmpi, rsprng
Depends On Me PREDAsampledata
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package PREDA_1.29.0.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.11 (El Capitan) PREDA_1.29.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
Package Short Url
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