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OSCA.basic

This is the development version of OSCA.basic; for the stable release version, see OSCA.basic.

All versions 3.24 (devel), 3.23 (release)

Single-Cell Analysis Basics


Bioconductor version: Development (3.24)

Most of the content in this book has been migrated to scrapbook (https://bioconductor.org/books/release/scrapbook). This book is only retained to provide redirections to the relevant scrapbook chapters.

Author: Robert Amezquita [aut], Aaron Lun [aut], Stephanie Hicks [aut], Raphael Gottardo [aut], Peter Hickey [cre]

Maintainer: Peter Hickey <peter.hickey at gmail.com>

Citation (from within R, enter citation("OSCA.basic")):

Robert Amezquita, Aaron Lun, Stephanie Hicks, Raphael Gottardo. OSCA.basic: Single-Cell Analysis Basics. doi:10.18129/B9.bioc.OSCA.basic, R package version 1.21.0, https://bioconductor.org/packages/OSCA.basic.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("OSCA.basic")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("OSCA.basic")
Link to book HTML
Reference ManualPDF

Details

biocViews ImmunoOncologyWorkflow, SingleCellWorkflow, Software, Workflow
Version1.21.0
In Bioconductor sinceBioC 3.23 (R-4.6) (< 6 months)
License CC BY 4.0
Depends scrapbook
Imports
System Requirements
URLhttps://github.com/OSCA-source/OSCA.basic
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me OSCA.advanced
Suggests Me OSCA
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/OSCA.basic
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/OSCA.basic
Package Short Url https://bioconductor.org/packages/OSCA.basic/
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