MBAmethyl
This is the development version of MBAmethyl; for the stable release version, see MBAmethyl.
All Bioconductor versions of MBAmethyl
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0
Model-based analysis of DNA methylation data
Bioconductor version: 3.24 · Package version: 1.47.0
This package provides a function for reconstructing DNA methylation values from raw measurements. It iteratively implements the group fused lars to smooth related-by-location methylation values and the constrained least squares to remove probe affinity effect across multiple sequences.
Author: Tao Wang, Mengjie Chen
Maintainer: Tao Wang <tao.wang.tw376 at yale.edu>
Citation
From within R, enter citation("MBAmethyl"):
Tao Wang, Mengjie Chen. MBAmethyl: Model-based analysis of DNA methylation data. doi:10.18129/B9.bioc.MBAmethyl, R package version 1.47.0, https://bioconductor.org/packages/MBAmethyl.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("MBAmethyl")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.47.0 |
| License | Artistic-2.0 |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.0 (R-3.1) (11 years) |
| Downloads rank | 2084 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | DNAMethylation, MethylationArray, Software |
| Package Short Url | https://bioconductor.org/packages/MBAmethyl/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MBAmethyl")| MBAmethyl Vignette | R Script | |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | MBAmethyl_1.47.0.tar.gz |
| Windows binary (x86_64) | MBAmethyl_1.47.0.zip |
| macOS binary (arm64) | MBAmethyl_1.47.0.tgz |
| macOS binary (x86_64) | MBAmethyl_1.47.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/MBAmethyl |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/MBAmethyl |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 2.15)