ImageArray
A framework for on-disk and in-memory image arrays
Bioconductor version: 3.24 · Package version: 1.1.7
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
ImageArray provides a framework for on-disk and in-memory image arrays, specifically for pyramidal images stored in HDF5, Zarr and life sciences image file formats (OME Bio-Formats).
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ImageArray")Details
| Maintainer | Artür Manukyan <artur-man@hotmail.com> |
| Author | Artür Manukyan [aut, cre] (ORCID: <https://orcid.org/0000-0002-0441-9517>), Helmholtz Association [fnd] (https://www.helmholtz.de, ROR: <https://ror.org/0281dp749>) |
| License | MIT + file LICENSE |
| URL | https://github.com/BIMSBbioinfo/ImageArray |
| Bug Reports | https://github.com/BIMSBbioinfo/ImageArray/issues |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/ImageArray/ |
Citation
From within R, enter citation("ImageArray"):
Artür Manukyan. ImageArray: A framework for on-disk and in-memory image arrays. doi:10.18129/B9.bioc.ImageArray, R package version 1.1.7, https://bioconductor.org/packages/ImageArray.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | ImageArray_1.1.7.tar.gz |
| Windows binary (x86_64) | ImageArray_1.1.7.zip |
| macOS binary (arm64) | ImageArray_1.1.7.tgz |
| macOS binary (x86_64) | ImageArray_1.1.7.tgz |
Dependencies
Depends: R (>= 4.5.0), EBImage
Imports: methods, grDevices, S4Arrays, S4Vectors, DelayedArray, rhdf5, HDF5Array, Rarr (>= 2.1.27), ZarrArray, magick, tools, BiocGenerics
Suggests: testthat (>= 3.0.0), knitr, ggplot2, shiny, RBioFormats, BiocFileCache, BiocStyle