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IdeoViz

This is the development version of IdeoViz; for the stable release version, see IdeoViz.

Plots data (continuous/discrete) along chromosomal ideogram


Bioconductor version: Development (3.19)

Plots data associated with arbitrary genomic intervals along chromosomal ideogram.

Author: Shraddha Pai <shraddha.pai at utoronto.ca>, Jingliang Ren

Maintainer: Shraddha Pai <shraddha.pai at utoronto.ca>

Citation (from within R, enter citation("IdeoViz")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("IdeoViz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews Microarray, Software, Visualization
Version 1.39.1
In Bioconductor since BioC 3.0 (R-3.1) (9.5 years)
License GPL-2
Depends R (>= 3.5.0), Biobase, IRanges, GenomicRanges, RColorBrewer, rtracklayer, graphics, GenomeInfoDb
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package IdeoViz_1.39.1.tar.gz
Windows Binary IdeoViz_1.39.1.zip (64-bit only)
macOS Binary (x86_64) IdeoViz_1.39.1.tgz
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/IdeoViz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/IdeoViz
Bioc Package Browser https://code.bioconductor.org/browse/IdeoViz/
Package Short Url https://bioconductor.org/packages/IdeoViz/
Package Downloads Report Download Stats