• Home
• Bioconductor 3.24
• Software Packages
• DNAshapeR (development version)

DNAshapeR

This is the development version of DNAshapeR; for the stable release version, see DNAshapeR.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3

High-throughput prediction of DNA shape features

DOI: 10.18129/B9.bioc.DNAshapeR

Bioconductor version: Development (3.24)

DNAhapeR is an R/BioConductor package for ultra-fast, high-throughput predictions of DNA shape features. The package allows to predict, visualize and encode DNA shape features for statistical learning.

Author: Tsu-Pei Chiu and Federico Comoglio

Maintainer: Tsu-Pei Chiu <tsupeich at usc.edu>

Citation (from within R, enter citation("DNAshapeR")):

Tsu-Pei Chiu and Federico Comoglio. DNAshapeR: High-throughput prediction of DNA shape features. doi:10.18129/B9.bioc.DNAshapeR, R package version 1.41.0, https://bioconductor.org/packages/DNAshapeR.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("DNAshapeR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DNAshapeR")

Details

Package Archives

Follow Installation instructions to use this package in your R session.