DOI: 10.18129/B9.bioc.CRImage    

This is the development version of CRImage; for the stable release version, see CRImage.

CRImage a package to classify cells and calculate tumour cellularity

Bioconductor version: Development (3.9)

CRImage provides functionality to process and analyze images, in particular to classify cells in biological images. Furthermore, in the context of tumor images, it provides functionality to calculate tumour cellularity.

Author: Henrik Failmezger <failmezger at>, Yinyin Yuan <Yinyin.Yuan at>, Oscar Rueda <oscar.rueda at>, Florian Markowetz <Florian.Markowetz at>

Maintainer: Henrik Failmezger <failmezger at>, Yinyin Yuan <Yinyin.Yuan at>

Citation (from within R, enter citation("CRImage")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("CRImage", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script CRImage Manual
PDF   Reference Manual


biocViews CellBiology, Classification, Software
Version 1.31.0
In Bioconductor since BioC 2.7 (R-2.12) (8.5 years)
License Artistic-2.0
Depends EBImage, DNAcopy, aCGH
Imports MASS, e1071, foreach, sgeostat
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package CRImage_1.31.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan) CRImage_1.31.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
Package Short Url
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