BiocCheck

DOI: 10.18129/B9.bioc.BiocCheck    

This is the development version of BiocCheck; for the stable release version, see BiocCheck.

Bioconductor-specific package checks

Bioconductor version: Development (3.9)

Executes Bioconductor-specific package checks.

Author: Bioconductor Package Maintainer [aut, cre], Lori Shepherd [ctb], Daniel von Twisk [ctb], Kevin Rue [ctb]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BiocCheck")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("BiocCheck", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocCheck")

 

HTML R Script BiocCheck: Ensuring Bioconductor package guidelines
PDF   Reference Manual
Text   NEWS

Details

biocViews Infrastructure, Software
Version 1.19.1
In Bioconductor since BioC 2.14 (R-3.1) (4.5 years)
License Artistic-2.0
Depends R (>= 3.5.0)
Imports biocViews(>= 1.33.7), BiocManager, stringdist, graph, httr, tools, optparse, codetools, methods, utils, knitr
LinkingTo
Suggests RUnit, BiocGenerics, Biobase, RJSONIO, rmarkdown, devtools (>= 1.4.1)
SystemRequirements
Enhances codetoolsBioC
URL https://github.com/Bioconductor/BiocCheck/issues
Depends On Me
Imports Me ExperimentHubData
Suggests Me CNPBayes, curatedMetagenomicData, HMP16SData
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BiocCheck_1.19.1.tar.gz
Windows Binary BiocCheck_1.19.1.zip
Mac OS X 10.11 (El Capitan) BiocCheck_1.19.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/BiocCheck
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BiocCheck
Package Short Url http://bioconductor.org/packages/BiocCheck/
Package Downloads Report Download Stats

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