BiocBook
Write, containerize, publish and version Quarto books with Bioconductor
Bioconductor version: 3.24 · Package version: 1.11.1
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
A BiocBook can be created by authors (e.g. R developers, but also scientists, teachers, communicators, ...) who wish to 1) write (compile a body of biological and/or bioinformatics knowledge), 2) containerize (provide Docker images to reproduce the examples illustrated in the compendium), 3) publish (deploy an online book to disseminate the compendium), and 4) version (automatically generate specific online book versions and Docker images for specific Bioconductor releases).
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BiocBook")Details
| Maintainer | Jacques Serizay <jacquesserizay@gmail.com> |
| Author | Jacques Serizay [aut, cre] |
| License | MIT + file LICENSE |
| URL | https://bioconductor.org/packages/BiocBook |
| Bug Reports | https://github.com/js2264/BiocBook/issues |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Infrastructure, ReportWriting, Software |
| Package Short Url | https://bioconductor.org/packages/BiocBook/ |
Citation
From within R, enter citation("BiocBook"):
Jacques Serizay. BiocBook: Write, containerize, publish and version Quarto books with Bioconductor. doi:10.18129/B9.bioc.BiocBook, R package version 1.11.1, https://bioconductor.org/packages/BiocBook.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | BiocBook_1.11.1.tar.gz |
| Windows binary (x86_64) | BiocBook_1.11.1.zip |
| macOS binary (arm64) | BiocBook_1.11.1.tgz |
| macOS binary (x86_64) | BiocBook_1.11.1.tgz |