AnVILWorkflow
Run workflows implemented in Terra/AnVIL workspace
Bioconductor version: 3.24 · Package version: 1.13.1
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
The AnVIL is a cloud computing resource developed in part by the National Human Genome Research Institute. The main cloud-based genomics platform deported by the AnVIL project is Terra. The AnVILWorkflow package allows remote access to Terra implemented workflows, enabling end-user to utilize Terra/ AnVIL provided resources - such as data, workflows, and flexible/scalble computing resources - through the conventional R functions.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("AnVILWorkflow")Details
| Maintainer | Sehyun Oh <shbrief@gmail.com> |
| Author | Sehyun Oh [aut, cre] (ORCID: <https://orcid.org/0000-0002-9490-3061>), Marcel Ramos [ctb] (ORCID: <https://orcid.org/0000-0002-3242-0582>), Kai Gravel-Pucillo [aut] |
| License | Artistic-2.0 |
| URL | https://github.com/shbrief/AnVILWorkflow |
| Bug Reports | https://github.com/shbrief/AnVILWorkflow/issues |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Infrastructure, Software |
| Package Short Url | https://bioconductor.org/packages/AnVILWorkflow/ |
Citation
From within R, enter citation("AnVILWorkflow"):
Sehyun Oh, Kai Gravel-Pucillo. AnVILWorkflow: Run workflows implemented in Terra/AnVIL workspace. doi:10.18129/B9.bioc.AnVILWorkflow, R package version 1.13.1, https://bioconductor.org/packages/AnVILWorkflow.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | AnVILWorkflow_1.13.1.tar.gz |
| Windows binary (x86_64) | AnVILWorkflow_1.13.1.zip |
| macOS binary (arm64) | AnVILWorkflow_1.13.1.tgz |
| macOS binary (x86_64) | AnVILWorkflow_1.13.1.tgz |